Scientific papers using the hSDM R package

Authier M., G. Dorémus Ghislain, H. Falchetto, V. Ridoux, and G. Vieilledent. 2016. Estimating marine mammal occupancy with single-visit surveys. Marine Mammal Science. in review.

Pennino M. G., R. Vilela, J. Valeiras, and J. M. Bellido. 2017. Discard management: A spatial multi-criteria approach. Marine Policy. 77: 144 – 151.

Costa T. L., M. G. Pennino, and L. F. Mendes. 2017. Identifying ecological barriers in marine environment: The case study of Dasyatis marianae. Marine Environmental Research, 125, 1-9.

Plumptre A. J., S. Nixon, D. Kujirakwinja, G. Vieilledent, R. Critchlow, R. Nishuli, A. Kirkby, E. A. Williamson, and J. S. Hall. 2016. Catastrophic decline of world’s largest primate: 80% loss of Grauer’s gorilla (Gorilla beringei graueri) population makes it critically endangered. PLoS ONE. 11(10): e0162697.

Pennino M. G., B. Mérigot, V. P. Fonseca, V. Monni, and A. Rotta. 2016. Habitat modeling for cetacean management: Spatial distribution in the southern Pelagos Sanctuary (Mediterranean Sea). Deep Sea Research Part II: Topical Studies in Oceanography. in press.

Vilela R., U. Pena, R. Esteban and R. Koemans. 2016. Bayesian spatial modeling of cetacean sightings during a seismic acquisition survey. Marine Pollution Bulletin. 109(1): 512-501.

Wilson A. M. and W. Jetz. 2016. Remotely Sensed High-Resolution Global Cloud Dynamics for Predicting Ecosystem and Biodiversity Distributions. PLoS Biology. 14(3): e1002415.

Domisch S., A. M. Wilson and W. Jetz. 2015. Model-based integration of observed and expert-based information for assessing the geographic and environmental distribution of freshwater species. Ecography. 39: 1078-1088.

Scientific papers citing the hSDM R package

Herrando S., Keller V., Voříšek P., Kipson M., Franch M., Anton M., Pla M., Villero D., Sierdsema H., Kampichler C., Telenský T., Gillings S., Johnston A., Gottschalk T., Guélat J., Sattler T., Brotons L., Titeux N., Jiguet F., Kéry M., and Milanesi P. (2017). High resolution maps for the second European Breeding Bird Atlas: A first provision of standardised data and pilot modelled maps. Vogelwelt, 2017, vol. 137, p. 33-41. pdf

Guillera-Arroita, G. (2016). Modelling of species distributions, range dynamics and communities under imperfect detection: advances, challenges and opportunities. Ecography. 39: 1-15.

Bird, T. J., Bates, A. E., Lefcheck, J. S., Hill, N. A., Thomson, R. J., Edgar, G. J., … and Pecl, G. T. (2014). Statistical solutions for error and bias in global citizen science datasets. Biological Conservation. 173: 144-154.

Lee, D. (2013). CARBayes: An R package for Bayesian spatial modeling with conditional autoregressive priors. Journal of Statistical Software. 55(13): 1-24.

Mazerolle, M. J. (2015). Estimating Detectability and Biological Parameters of Interest with the Use of the R Environment. Journal of Herpetology. 49(4):541-559.

Thuiller, W. (2014). Editorial commentary on “BIOMOD – optimizing predictions of species distributions and projecting potential future shifts under global change”. Global Change Biology. 20: 3591-3592.